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deepvent exo dna polymerase  (New England Biolabs)


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    New England Biolabs deepvent exo dna polymerase
    Deepvent Exo Dna Polymerase, supplied by New England Biolabs, used in various techniques. Bioz Stars score: 95/100, based on 334 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/deepvent+dna+polymerase/Deep+Vent+(exo/us12553044-608-22-25
    Average 95 stars, based on 334 article reviews
    deepvent exo dna polymerase - by Bioz Stars, 2026-09
    95/100 stars

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    Expressing:

    Article Title: Mitochondria-targeted oligomeric α-synuclein induces TOM40 degradation and mitochondrial dysfunction in Parkinson's disease and parkinsonism-dementia of Guam.
    Article Snippet: NPSCs were derived from both the control and SNCA-Tri iPSC lines using PSC neural induction medium (Thermo Fisher A1647801, USA) following the manufacturer’s instructions and the protocol explained earlier [11]. .. Construction of pCW WT-α-Syn-Flag Expression Vector: The doxycycline (Dox) inducible mammalian pCW WT-α-Syn-Flag expression vector was created by inserting the full-length α-Syn, amplified from the pcDNA WT-αSyn plasmid using DeepVent DNA polymerase (NEB-LABS M0258, USA) and CW WT α-Syn-FLAG F/R primer pair. .. This fragment was then cloned into the pCW-Cas9 vector (a generous gift from Eric Lander and David Sabatini, Addgene plasmid 50661) at 5 ́-NheI and 3 ́-blunt-ended sites.

    Article Title: Mitochondria-Targeted Oligomeric α-Synuclein Induces TOM40 Degradation and Mitochondrial Dysfunction in Parkinson’s Disease and Parkinsonism-Dementia of Guam
    Article Snippet: Neural progenitor stem cells (NPSCs) were derived from both the control and SNCA-tri iPSC lines using PSC neural induction medium (Thermo Fisher A1647801, USA) following the manufacturer’s instructions and the protocol explained earlier 11. .. Plasmid constructs Construction of pCW WT-α-Syn-Flag Expression Vector: The doxycycline (Dox) inducible mammalian pCW WT-α-Syn-Flag expression vector was created by inserting the full-length α-Syn, ampli ed from the pcDNA WT-α-Syn plasmid using DeepVent DNA polymerase (NEB-LABS M0258, USA) and CW WT α-Syn-FLAG F/R primer pair. .. This fragment was then cloned into the pCW-Cas9 vector (a generous gift from Eric Lander and David Sabatini, Addgene plasmid 50661) at 5 ́-NheI and 3 ́-blunt-ended sites.

    Article Title: Mitochondria-targeted oligomeric α-synuclein induces TOM40 degradation and mitochondrial dysfunction in Parkinson’s disease and parkinsonism-dementia of Guam
    Article Snippet: NPSCs were derived from both the control and SNCA-Tri iPSC lines using PSC neural induction medium (Thermo Fisher A1647801, USA) following the manufacturer’s instructions and the protocol explained earlier [ ]. .. Construction of pCW WT-α-Syn-Flag Expression Vector: The doxycycline (Dox) inducible mammalian pCW WT-α-Syn-Flag expression vector was created by inserting the full-length α-Syn, amplified from the pcDNA WT-α-Syn plasmid using DeepVent DNA polymerase (NEB-LABS M0258, USA) and CW WT α-Syn-FLAG F/R primer pair. .. This fragment was then cloned into the pCW-Cas9 vector (a generous gift from Eric Lander and David Sabatini, Addgene plasmid 50661) at 5 ́-NheI and 3 ́-blunt-ended sites.

    Plasmid Preparation:

    Article Title: Mitochondria-targeted oligomeric α-synuclein induces TOM40 degradation and mitochondrial dysfunction in Parkinson's disease and parkinsonism-dementia of Guam.
    Article Snippet: NPSCs were derived from both the control and SNCA-Tri iPSC lines using PSC neural induction medium (Thermo Fisher A1647801, USA) following the manufacturer’s instructions and the protocol explained earlier [11]. .. Construction of pCW WT-α-Syn-Flag Expression Vector: The doxycycline (Dox) inducible mammalian pCW WT-α-Syn-Flag expression vector was created by inserting the full-length α-Syn, amplified from the pcDNA WT-αSyn plasmid using DeepVent DNA polymerase (NEB-LABS M0258, USA) and CW WT α-Syn-FLAG F/R primer pair. .. This fragment was then cloned into the pCW-Cas9 vector (a generous gift from Eric Lander and David Sabatini, Addgene plasmid 50661) at 5 ́-NheI and 3 ́-blunt-ended sites.

    Article Title: Mitochondria-Targeted Oligomeric α-Synuclein Induces TOM40 Degradation and Mitochondrial Dysfunction in Parkinson’s Disease and Parkinsonism-Dementia of Guam
    Article Snippet: Neural progenitor stem cells (NPSCs) were derived from both the control and SNCA-tri iPSC lines using PSC neural induction medium (Thermo Fisher A1647801, USA) following the manufacturer’s instructions and the protocol explained earlier 11. .. Plasmid constructs Construction of pCW WT-α-Syn-Flag Expression Vector: The doxycycline (Dox) inducible mammalian pCW WT-α-Syn-Flag expression vector was created by inserting the full-length α-Syn, ampli ed from the pcDNA WT-α-Syn plasmid using DeepVent DNA polymerase (NEB-LABS M0258, USA) and CW WT α-Syn-FLAG F/R primer pair. .. This fragment was then cloned into the pCW-Cas9 vector (a generous gift from Eric Lander and David Sabatini, Addgene plasmid 50661) at 5 ́-NheI and 3 ́-blunt-ended sites.

    Article Title: Mitochondria-targeted oligomeric α-synuclein induces TOM40 degradation and mitochondrial dysfunction in Parkinson’s disease and parkinsonism-dementia of Guam
    Article Snippet: NPSCs were derived from both the control and SNCA-Tri iPSC lines using PSC neural induction medium (Thermo Fisher A1647801, USA) following the manufacturer’s instructions and the protocol explained earlier [ ]. .. Construction of pCW WT-α-Syn-Flag Expression Vector: The doxycycline (Dox) inducible mammalian pCW WT-α-Syn-Flag expression vector was created by inserting the full-length α-Syn, amplified from the pcDNA WT-α-Syn plasmid using DeepVent DNA polymerase (NEB-LABS M0258, USA) and CW WT α-Syn-FLAG F/R primer pair. .. This fragment was then cloned into the pCW-Cas9 vector (a generous gift from Eric Lander and David Sabatini, Addgene plasmid 50661) at 5 ́-NheI and 3 ́-blunt-ended sites.

    Article Title: Optimization of Replication, Transcription, and Translation in a Semi-Synthetic Organism
    Article Snippet: PCR amplifications were performed in a CFX Connect Real-Time PCR Detection System (BioRad). .. Plasmid minipreps, or Golden Gate assembled plasmids (0.5 μL to 2 μL, 0.5 ng/μL to 5 ng/μL), or dNaM-containing oligonucleotides (0.025 ng) were PCR amplified in total reaction volumes of 15 μL under the following conditions: OneTaq Standard Reaction Buffer (1×, New England BioLabs), dNTPs (400 μM), SYBR Green I (1×, Life Technologies), MgSO4 (2.2 mM), primers P3-4 or P5-6 (1 μM each, see Table S4 for primer sequences), d5SICSTP (65 μM), dMMO2BIOTP (65 μM; structure shown in Figure S6), OneTaq DNA polymerase (0.27 U, New England BioLabs), DeepVent DNA polymerase (0.105 U, New England BioLabs). ..

    Amplification:

    Article Title: Mitochondria-targeted oligomeric α-synuclein induces TOM40 degradation and mitochondrial dysfunction in Parkinson's disease and parkinsonism-dementia of Guam.
    Article Snippet: NPSCs were derived from both the control and SNCA-Tri iPSC lines using PSC neural induction medium (Thermo Fisher A1647801, USA) following the manufacturer’s instructions and the protocol explained earlier [11]. .. Construction of pCW WT-α-Syn-Flag Expression Vector: The doxycycline (Dox) inducible mammalian pCW WT-α-Syn-Flag expression vector was created by inserting the full-length α-Syn, amplified from the pcDNA WT-αSyn plasmid using DeepVent DNA polymerase (NEB-LABS M0258, USA) and CW WT α-Syn-FLAG F/R primer pair. .. This fragment was then cloned into the pCW-Cas9 vector (a generous gift from Eric Lander and David Sabatini, Addgene plasmid 50661) at 5 ́-NheI and 3 ́-blunt-ended sites.

    Article Title: Mitochondria-targeted oligomeric α-synuclein induces TOM40 degradation and mitochondrial dysfunction in Parkinson’s disease and parkinsonism-dementia of Guam
    Article Snippet: NPSCs were derived from both the control and SNCA-Tri iPSC lines using PSC neural induction medium (Thermo Fisher A1647801, USA) following the manufacturer’s instructions and the protocol explained earlier [ ]. .. Construction of pCW WT-α-Syn-Flag Expression Vector: The doxycycline (Dox) inducible mammalian pCW WT-α-Syn-Flag expression vector was created by inserting the full-length α-Syn, amplified from the pcDNA WT-α-Syn plasmid using DeepVent DNA polymerase (NEB-LABS M0258, USA) and CW WT α-Syn-FLAG F/R primer pair. .. This fragment was then cloned into the pCW-Cas9 vector (a generous gift from Eric Lander and David Sabatini, Addgene plasmid 50661) at 5 ́-NheI and 3 ́-blunt-ended sites.

    Article Title: Supporting Information PCR with an Expanded Genetic Alphabet
    Article Snippet: After quenching with EDTA to final concentration of 10 mM, the dsDNA templates were purified using a 1.8% agarose gel, quantified by fluorescent dye binding (Quant-iT dsDNA HS Assay kit, Invitrogen), sequenced (see Figures S5-S10), and used for PCR. .. PCR amplification of template D1 (1 ng) was carried out in 1 ThermoPol Reaction Buffer (New England Biolabs; 20 mM Tris-HCl buffer (pH 8.8), 10 mM KCl, 10 mM (NH4)2SO4, 4 mM MgSO4, 0.1% Triton X-100), 0.8 mM each natural dNTP, 1 μM each primer1 and primer2 and 0.03 unit/μL DeepVent DNA polymerase (New England Biolabs) on an iCycler Thermal Cycler (Bio-Rad Laboratories, Inc.). ..

    Article Title: Optimization of Replication, Transcription, and Translation in a Semi-Synthetic Organism
    Article Snippet: PCR amplifications were performed in a CFX Connect Real-Time PCR Detection System (BioRad). .. Plasmid minipreps, or Golden Gate assembled plasmids (0.5 μL to 2 μL, 0.5 ng/μL to 5 ng/μL), or dNaM-containing oligonucleotides (0.025 ng) were PCR amplified in total reaction volumes of 15 μL under the following conditions: OneTaq Standard Reaction Buffer (1×, New England BioLabs), dNTPs (400 μM), SYBR Green I (1×, Life Technologies), MgSO4 (2.2 mM), primers P3-4 or P5-6 (1 μM each, see Table S4 for primer sequences), d5SICSTP (65 μM), dMMO2BIOTP (65 μM; structure shown in Figure S6), OneTaq DNA polymerase (0.27 U, New England BioLabs), DeepVent DNA polymerase (0.105 U, New England BioLabs). ..

    Construct:

    Article Title: Mitochondria-Targeted Oligomeric α-Synuclein Induces TOM40 Degradation and Mitochondrial Dysfunction in Parkinson’s Disease and Parkinsonism-Dementia of Guam
    Article Snippet: Neural progenitor stem cells (NPSCs) were derived from both the control and SNCA-tri iPSC lines using PSC neural induction medium (Thermo Fisher A1647801, USA) following the manufacturer’s instructions and the protocol explained earlier 11. .. Plasmid constructs Construction of pCW WT-α-Syn-Flag Expression Vector: The doxycycline (Dox) inducible mammalian pCW WT-α-Syn-Flag expression vector was created by inserting the full-length α-Syn, ampli ed from the pcDNA WT-α-Syn plasmid using DeepVent DNA polymerase (NEB-LABS M0258, USA) and CW WT α-Syn-FLAG F/R primer pair. .. This fragment was then cloned into the pCW-Cas9 vector (a generous gift from Eric Lander and David Sabatini, Addgene plasmid 50661) at 5 ́-NheI and 3 ́-blunt-ended sites.

    other:

    Article Title: Chemically-enhanced primer compositions, methods and kits
    Article Snippet: Non-limiting examples of commercially available polymerases that can be used in the methods described herein include, but are not limited to, TaqFS®, AmpliTaq® CS (Applied Biosystems), AmpliTaq FS (Applied Biosystems), AmpliTaq Gold ° (Applied Biosystems), Kentaq1 (AB Peptide, St. Louis, Mo.), Taquenase (ScienTech Corp., St. Louis, Mo.), ThermoSequenase (Amersham), Bst polymerase, VentR(exo−) DNA polymerase, ReaderTMTaq DNA polymerase, VENTTM DNA polymerase (New England Biolabs), DEEPVENTTM DNA polymerase (New England Biolabs), PFUTurboTM DNA polymerase (Stratagene), Tth DNA polymerase, KlenTaq-1 polymerase, SEQUENASETM 1.0 DNA polymerase (Amersham Biosciences), and SEQUENASE 2.0 DNA polymerase (United States Biochemicals).

    Polymerase Chain Reaction:

    Article Title: Supporting Information PCR with an Expanded Genetic Alphabet
    Article Snippet: After quenching with EDTA to final concentration of 10 mM, the dsDNA templates were purified using a 1.8% agarose gel, quantified by fluorescent dye binding (Quant-iT dsDNA HS Assay kit, Invitrogen), sequenced (see Figures S5-S10), and used for PCR. .. PCR amplification of template D1 (1 ng) was carried out in 1 ThermoPol Reaction Buffer (New England Biolabs; 20 mM Tris-HCl buffer (pH 8.8), 10 mM KCl, 10 mM (NH4)2SO4, 4 mM MgSO4, 0.1% Triton X-100), 0.8 mM each natural dNTP, 1 μM each primer1 and primer2 and 0.03 unit/μL DeepVent DNA polymerase (New England Biolabs) on an iCycler Thermal Cycler (Bio-Rad Laboratories, Inc.). ..

    Article Title: Optimization of Replication, Transcription, and Translation in a Semi-Synthetic Organism
    Article Snippet: PCR amplifications were performed in a CFX Connect Real-Time PCR Detection System (BioRad). .. Plasmid minipreps, or Golden Gate assembled plasmids (0.5 μL to 2 μL, 0.5 ng/μL to 5 ng/μL), or dNaM-containing oligonucleotides (0.025 ng) were PCR amplified in total reaction volumes of 15 μL under the following conditions: OneTaq Standard Reaction Buffer (1×, New England BioLabs), dNTPs (400 μM), SYBR Green I (1×, Life Technologies), MgSO4 (2.2 mM), primers P3-4 or P5-6 (1 μM each, see Table S4 for primer sequences), d5SICSTP (65 μM), dMMO2BIOTP (65 μM; structure shown in Figure S6), OneTaq DNA polymerase (0.27 U, New England BioLabs), DeepVent DNA polymerase (0.105 U, New England BioLabs). ..

    SYBR Green Assay:

    Article Title: Optimization of Replication, Transcription, and Translation in a Semi-Synthetic Organism
    Article Snippet: PCR amplifications were performed in a CFX Connect Real-Time PCR Detection System (BioRad). .. Plasmid minipreps, or Golden Gate assembled plasmids (0.5 μL to 2 μL, 0.5 ng/μL to 5 ng/μL), or dNaM-containing oligonucleotides (0.025 ng) were PCR amplified in total reaction volumes of 15 μL under the following conditions: OneTaq Standard Reaction Buffer (1×, New England BioLabs), dNTPs (400 μM), SYBR Green I (1×, Life Technologies), MgSO4 (2.2 mM), primers P3-4 or P5-6 (1 μM each, see Table S4 for primer sequences), d5SICSTP (65 μM), dMMO2BIOTP (65 μM; structure shown in Figure S6), OneTaq DNA polymerase (0.27 U, New England BioLabs), DeepVent DNA polymerase (0.105 U, New England BioLabs). ..



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